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SPLISOSM

Getting Started

  • Welcome
  • Installation
  • Quick Start
  • Feature Quantification
  • Statistical Methods
  • Frequently Asked Questions

Tutorials

  • Tutorial Gallery
    • Quick start demo (Visium ONT)
    • Single-cell segmented data (Xenium Prime 5K)
    • SplisosmNP vs SplisosmFFT (Visium FFPE, probe)
    • Visium HD FFPE (probe) Part I
    • Visium HD FFPE (probe) Part II
    • Visium HD 3’ (peak)
    • Visium HD ONT (isoform)
    • Xenium Prime 5K (codeword)

API Reference

  • splisosm
    • splisosm.dataset
    • splisosm.hyptest_fft
    • splisosm.hyptest_glmm
    • splisosm.hyptest_np
    • splisosm.io
    • splisosm.kernel
    • splisosm.kernel_gpr
    • splisosm.likelihood
    • splisosm.logger
    • splisosm.model
    • splisosm.simulation
    • splisosm.utils
  • References

Release Notes

  • Changelog
  • .rst

splisosm

Contents

  • Submodules

splisosm#

Submodules#

  • splisosm.dataset
  • splisosm.hyptest_fft
  • splisosm.hyptest_glmm
  • splisosm.hyptest_np
  • splisosm.io
  • splisosm.kernel
  • splisosm.kernel_gpr
  • splisosm.likelihood
  • splisosm.logger
  • splisosm.model
  • splisosm.simulation
  • splisosm.utils

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splisosm.dataset

Contents
  • Submodules

By Jiayu Su

© Copyright 2026, Jiayu Su.